Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 TOB2P1-201ENST00000469761 992 ntBASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB2Q9Y5E7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 NUS1P1-201ENST00000446295 882 ntBASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 AC005082.1-201ENST00000413042 2259 ntBASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 KRT89P-201ENST00000620027 1478 ntBASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB2Q9Y5E7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 AC090164.3-201ENST00000610780 2143 ntBASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 AC009113.1-201ENST00000570267 2443 ntBASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 AC104581.1-202ENST00000635932 2618 ntBASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB2Q9Y5E7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 MIR149-201ENST00000384879 89 ntBASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 AC073592.3-201ENST00000625118 1834 ntBASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 AL353692.3-201ENST00000407031 1396 ntBASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB2Q9Y5E7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms