Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 CD177P1-201ENST00000606252 935 ntBASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 AC131212.4-201ENST00000623606 975 ntBASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 KRT17P2-201ENST00000300992 1314 ntBASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 AD000864.1-201ENST00000624076 2295 ntBASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 FAM197Y1-201ENST00000421178 764 ntBASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 AL355355.2-201ENST00000442321 338 ntBASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HCC1Q9Y3T6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 MIR4785-201ENST00000585005 73 ntBASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 AL031985.4-201ENST00000642138 673 ntBASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HCC1Q9Y3T6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 SNORA78-201ENST00000459373 127 ntBASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 AL445675.2-201ENST00000620291 557 ntBASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HCC1Q9Y3T6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms