Protein–RNA interactions for Protein: Q9UQB3

CTNND2, Catenin delta-2, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2Q9UQB3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 LTB4R2-202ENST00000528054 3092 ntBASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTNND2Q9UQB3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 HOXB1-202ENST00000577092 1414 ntBASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CTNND2Q9UQB3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 MIR1238-201ENST00000408483 83 ntBASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 TSPY17P-201ENST00000450329 467 ntBASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 MIR4785-201ENST00000585005 73 ntBASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND2Q9UQB3 AC092338.2-201ENST00000568827 1415 ntBASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 LINC00896-202ENST00000609602 2128 ntBASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 MIR718-201ENST00000390190 70 ntBASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 FITM1-202ENST00000559294 800 ntBASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.27■□□□□ 0.84
CTNND2Q9UQB3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND2Q9UQB3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 SLC25A6P5-201ENST00000435663 894 ntBASIC20.26■□□□□ 0.83
CTNND2Q9UQB3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms