Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 AC079781.3-201ENST00000449110 356 ntBASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 INTS4P1-201ENST00000438455 1935 ntBASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPO2Q9UMS6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 RCN1P2-201ENST00000398357 915 ntBASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 AP002469.2-201ENST00000531724 424 ntBASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNPO2Q9UMS6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 RBM17P3-201ENST00000417687 1192 ntBASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 AL662844.1-201ENST00000546340 181 ntBASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 PHGDH-209ENST00000641074 1780 ntBASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPO2Q9UMS6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNPO2Q9UMS6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms