Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 KRT18P22-201ENST00000402024 1347 ntBASIC18.19■□□□□ 0.5
TSR3Q9UJK0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSR3Q9UJK0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 MYC-208ENST00000641036 567 ntBASIC18.18■□□□□ 0.5
TSR3Q9UJK0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 AC073592.3-201ENST00000625118 1834 ntBASIC18.18■□□□□ 0.5
TSR3Q9UJK0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSR3Q9UJK0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.17■□□□□ 0.5
TSR3Q9UJK0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 HMGA1P5-201ENST00000412453 271 ntBASIC18.17■□□□□ 0.5
TSR3Q9UJK0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC010203.1-204ENST00000548782 407 ntBASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 AC145285.6-201ENST00000604632 637 ntBASIC18.17■□□□□ 0.5
TSR3Q9UJK0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSR3Q9UJK0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 AC211429.1-201ENST00000415277 523 ntBASIC18.16■□□□□ 0.5
TSR3Q9UJK0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 KRT18P57-201ENST00000443599 1254 ntBASIC18.16■□□□□ 0.5
TSR3Q9UJK0 ATP5G1P1-201ENST00000448724 379 ntBASIC18.16■□□□□ 0.5
TSR3Q9UJK0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 AC135776.1-201ENST00000319817 2481 ntBASIC18.16■□□□□ 0.5
TSR3Q9UJK0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSR3Q9UJK0 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms