Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 RPS2P55-201ENST00000397318 883 ntBASIC20.97■□□□□ 0.95
USP25Q9UHP3 AC012618.2-201ENST00000428058 849 ntBASIC20.97■□□□□ 0.95
USP25Q9UHP3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 AC107956.1-201ENST00000494359 873 ntBASIC20.97■□□□□ 0.95
USP25Q9UHP3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.97■□□□□ 0.95
USP25Q9UHP3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.97■□□□□ 0.95
USP25Q9UHP3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP25Q9UHP3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.96■□□□□ 0.95
USP25Q9UHP3 AC093677.2-201ENST00000600169 1863 ntBASIC20.96■□□□□ 0.95
USP25Q9UHP3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 CA15P1-201ENST00000481698 905 ntBASIC20.96■□□□□ 0.95
USP25Q9UHP3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 AC008622.2-201ENST00000617006 1229 ntBASIC20.96■□□□□ 0.95
USP25Q9UHP3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP25Q9UHP3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP25Q9UHP3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.95■□□□□ 0.95
USP25Q9UHP3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
USP25Q9UHP3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP25Q9UHP3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 AC084018.2-201ENST00000613093 2607 ntBASIC20.95■□□□□ 0.94
USP25Q9UHP3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.95■□□□□ 0.94
USP25Q9UHP3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 GCSHP5-201ENST00000443090 522 ntBASIC20.95■□□□□ 0.94
USP25Q9UHP3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 TNRC18P3-201ENST00000441896 2691 ntBASIC20.95■□□□□ 0.94
USP25Q9UHP3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP25Q9UHP3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
USP25Q9UHP3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 MIR564-202ENST00000385049 94 ntBASIC20.94■□□□□ 0.94
USP25Q9UHP3 AP000593.1-201ENST00000393668 712 ntBASIC20.94■□□□□ 0.94
USP25Q9UHP3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.94■□□□□ 0.94
USP25Q9UHP3 AC098590.1-201ENST00000468126 897 ntBASIC20.94■□□□□ 0.94
USP25Q9UHP3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 AC233702.5-201ENST00000584107 538 ntBASIC20.94■□□□□ 0.94
USP25Q9UHP3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP25Q9UHP3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.94■□□□□ 0.94
USP25Q9UHP3 AC124067.4-201ENST00000519691 2379 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms