Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 AC099343.3-201ENST00000605834 2503 ntBASIC20.73■□□□□ 0.91
FBXO40Q9UH90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 LINC00602-201ENST00000629776 2065 ntBASIC20.73■□□□□ 0.91
FBXO40Q9UH90 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 RCN1P2-201ENST00000398357 915 ntBASIC20.72■□□□□ 0.91
FBXO40Q9UH90 AC132008.2-207ENST00000454517 770 ntBASIC20.72■□□□□ 0.91
FBXO40Q9UH90 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 TP73-AS1-207ENST00000624167 988 ntBASIC20.72■□□□□ 0.91
FBXO40Q9UH90 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO40Q9UH90 LINC01126-201ENST00000623515 1646 ntBASIC20.71■□□□□ 0.91
FBXO40Q9UH90 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 FAM197Y8-203ENST00000450145 560 ntBASIC20.71■□□□□ 0.91
FBXO40Q9UH90 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 AL138831.2-201ENST00000606564 490 ntBASIC20.71■□□□□ 0.91
FBXO40Q9UH90 BX640515.1-201ENST00000617215 977 ntBASIC20.71■□□□□ 0.91
FBXO40Q9UH90 AL773604.1-201ENST00000617417 272 ntBASIC20.71■□□□□ 0.91
FBXO40Q9UH90 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.71■□□□□ 0.91
FBXO40Q9UH90 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
FBXO40Q9UH90 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
FBXO40Q9UH90 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.7■□□□□ 0.9
FBXO40Q9UH90 RBM17P3-201ENST00000417687 1192 ntBASIC20.7■□□□□ 0.9
FBXO40Q9UH90 KRT18P67-201ENST00000432816 1264 ntBASIC20.7■□□□□ 0.9
FBXO40Q9UH90 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 AP001005.1-201ENST00000571755 1248 ntBASIC20.7■□□□□ 0.9
FBXO40Q9UH90 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 AC008608.2-201ENST00000606089 416 ntBASIC20.7■□□□□ 0.9
FBXO40Q9UH90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO40Q9UH90 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 AF186996.4-201ENST00000467186 377 ntBASIC20.69■□□□□ 0.9
FBXO40Q9UH90 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.69■□□□□ 0.9
FBXO40Q9UH90 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms