Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC009065.1-201ENST00000564055 1225 ntBASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 MIR3917-201ENST00000580971 93 ntBASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 LTB4R2-202ENST00000528054 3092 ntBASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 AC090164.3-201ENST00000610780 2143 ntBASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
PPARGC1AQ9UBK2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 AL163051.1-201ENST00000569214 1512 ntBASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 FAM8A6P-201ENST00000407496 1135 ntBASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 WIZP1-201ENST00000531444 2299 ntBASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.05■□□□□ 0.64
PPARGC1AQ9UBK2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 AC022616.7-201ENST00000525383 220 ntBASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
PPARGC1AQ9UBK2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 RASA4DP-201ENST00000460726 1199 ntBASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 LINC01238-205ENST00000567549 1107 ntBASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPARGC1AQ9UBK2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms