Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
THUMPD1Q9NXG2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 HOXB1-202ENST00000577092 1414 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 FLJ13224-201ENST00000313737 1514 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 GCSHP5-201ENST00000443090 522 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 REXO1L12P-201ENST00000622156 912 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD1Q9NXG2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
THUMPD1Q9NXG2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 TSPY17P-201ENST00000450329 467 ntBASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
THUMPD1Q9NXG2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 MIR149-201ENST00000384879 89 ntBASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 AL158047.1-201ENST00000445918 881 ntBASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 AC026471.5-201ENST00000615068 467 ntBASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THUMPD1Q9NXG2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms