Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RNF216Q9NWF9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF216Q9NWF9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RNF216Q9NWF9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.13■□□□□ 0.97
RNF216Q9NWF9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TSPY17P-201ENST00000450329 467 ntBASIC21.13■□□□□ 0.97
RNF216Q9NWF9 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 AC087388.1-201ENST00000571370 1112 ntBASIC21.13■□□□□ 0.97
RNF216Q9NWF9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
RNF216Q9NWF9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 NTF6B-201ENST00000591913 560 ntBASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TREX1-205ENST00000625293 1783 ntBASIC21.12■□□□□ 0.97
RNF216Q9NWF9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF216Q9NWF9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AK4P3-201ENST00000418260 669 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC092810.1-201ENST00000429208 1224 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC091515.1-201ENST00000548110 679 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AL133507.1-201ENST00000605269 557 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 FAM87A-204ENST00000613235 858 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC022960.3-201ENST00000619794 441 ntBASIC21.11■□□□□ 0.97
RNF216Q9NWF9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF216Q9NWF9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms