Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM248Q9NWD8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM248Q9NWD8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM248Q9NWD8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM248Q9NWD8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM248Q9NWD8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 Z83836.1-201ENST00000624605 1642 ntBASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 AC091076.1-201ENST00000610741 619 ntBASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 AC004263.2-201ENST00000617183 678 ntBASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 LINC00167-201ENST00000530583 1419 ntBASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM248Q9NWD8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 AL096828.2-201ENST00000567259 1965 ntBASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM248Q9NWD8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 AL353692.3-201ENST00000407031 1396 ntBASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM248Q9NWD8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM248Q9NWD8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 TSPY22P-201ENST00000427496 604 ntBASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 AC132938.6-201ENST00000623828 1655 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms