Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 TSPY5P-201ENST00000426936 936 ntBASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 RASA4DP-201ENST00000460726 1199 ntBASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 STARP1-201ENST00000397973 869 ntBASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 AK4P3-201ENST00000418260 669 ntBASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 HOMER2P1-201ENST00000455653 964 ntBASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN4Q9NRR5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 AL024508.2-201ENST00000607749 1894 ntBASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 AC006011.2-201ENST00000621313 1158 ntBASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBQLN4Q9NRR5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 PHGDH-209ENST00000641074 1780 ntBASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN4Q9NRR5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms