Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 AP000593.1-201ENST00000393668 712 ntBASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 AL450487.1-201ENST00000426799 995 ntBASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 AL157888.1-201ENST00000631930 593 ntBASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 HOXB1-202ENST00000577092 1414 ntBASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.14■□□□□ 0.65
ARHGEF4Q9NR80 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 AC011498.5-201ENST00000592027 486 ntBASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ARHGEF4Q9NR80 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 AL390961.4-201ENST00000623958 2535 ntBASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 AC135050.7-201ENST00000624508 2218 ntBASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 KRT18P23-201ENST00000435622 1283 ntBASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 MIR3917-201ENST00000580971 93 ntBASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 AC092119.3-201ENST00000612618 583 ntBASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF4Q9NR80 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF4Q9NR80 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms