Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 HLA-F-220ENST00000434407 884 ntBASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 AL354751.1-201ENST00000412768 1863 ntBASIC17.27■□□□□ 0.35
PRDM9Q9NQV7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.26■□□□□ 0.35
PRDM9Q9NQV7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 KRT89P-201ENST00000620027 1478 ntBASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 AL136038.3-201ENST00000561909 1096 ntBASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
PRDM9Q9NQV7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 AC017007.3-201ENST00000479865 435 ntBASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 VENTXP5-201ENST00000523979 775 ntBASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 ESPNP-201ENST00000270691 2015 ntBASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms