Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 AL158047.1-201ENST00000445918 881 ntBASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 AC104390.1-201ENST00000555663 520 ntBASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 AP003071.4-201ENST00000562276 1284 ntBASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM38AQ9H6F2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.02■□□□□ 0.31
TMEM38AQ9H6F2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM38AQ9H6F2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM38AQ9H6F2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM38AQ9H6F2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.02■□□□□ 0.31
TMEM38AQ9H6F2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 UNC93B2-201ENST00000285383 730 ntBASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 CCR12P-201ENST00000446203 998 ntBASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 AL024508.2-201ENST00000607749 1894 ntBASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM38AQ9H6F2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AC012317.2-201ENST00000623305 2251 ntBASIC17■□□□□ 0.31
TMEM38AQ9H6F2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 RBM17P1-201ENST00000453646 1190 ntBASIC17■□□□□ 0.31
TMEM38AQ9H6F2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 BX088651.1-201ENST00000540551 451 ntBASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 AC112497.1-201ENST00000624824 639 ntBASIC17■□□□□ 0.31
TMEM38AQ9H6F2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17■□□□□ 0.31
TMEM38AQ9H6F2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM38AQ9H6F2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms