Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL390719.2-201ENST00000606993 987 ntBASIC21.53■■□□□ 1.04
RNF41Q9H4P4 Z83836.1-201ENST00000624605 1642 ntBASIC21.53■■□□□ 1.04
RNF41Q9H4P4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 AC009113.1-201ENST00000570267 2443 ntBASIC21.53■■□□□ 1.04
RNF41Q9H4P4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AL020996.1-203ENST00000536896 2307 ntBASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF41Q9H4P4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF41Q9H4P4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF41Q9H4P4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF41Q9H4P4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PHGDH-209ENST00000641074 1780 ntBASIC21.51■■□□□ 1.03
RNF41Q9H4P4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF41Q9H4P4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AL353692.3-201ENST00000407031 1396 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AC104581.1-202ENST00000635932 2618 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AC093677.2-201ENST00000600169 1863 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 TSPY22P-201ENST00000427496 604 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 KRT8P26-201ENST00000534154 1276 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 AC004263.2-201ENST00000617183 678 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.5■■□□□ 1.03
RNF41Q9H4P4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms