Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 STARP1-201ENST00000397973 869 ntBASIC16.96■□□□□ 0.31
UBQLN3Q9H347 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.96■□□□□ 0.31
UBQLN3Q9H347 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 AC087388.1-201ENST00000571370 1112 ntBASIC16.96■□□□□ 0.31
UBQLN3Q9H347 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
UBQLN3Q9H347 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBQLN3Q9H347 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 MIR564-202ENST00000385049 94 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 AL031133.1-201ENST00000406807 723 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 KRT18P38-201ENST00000449496 1282 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 AL359075.1-203ENST00000462729 1002 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 KRT8P7-201ENST00000533003 1432 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 HOXB1-202ENST00000577092 1414 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 AC138932.1-201ENST00000534164 6830 ntBASIC16.95■□□□□ 0.3
UBQLN3Q9H347 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN3Q9H347 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 SEC1P-202ENST00000473944 940 ntBASIC16.94■□□□□ 0.3
UBQLN3Q9H347 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 AC112497.1-201ENST00000624824 639 ntBASIC16.94■□□□□ 0.3
UBQLN3Q9H347 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN3Q9H347 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms