Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
CDT1Q9H211 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.75■□□□□ 0.75
CDT1Q9H211 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.74■□□□□ 0.75
CDT1Q9H211 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDT1Q9H211 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDT1Q9H211 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.74■□□□□ 0.75
CDT1Q9H211 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.74■□□□□ 0.75
CDT1Q9H211 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.74■□□□□ 0.75
CDT1Q9H211 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.74■□□□□ 0.75
CDT1Q9H211 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.74■□□□□ 0.75
CDT1Q9H211 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.74■□□□□ 0.75
CDT1Q9H211 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDT1Q9H211 PHGDH-209ENST00000641074 1780 ntBASIC19.74■□□□□ 0.75
CDT1Q9H211 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDT1Q9H211 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 AC233702.3-201ENST00000578656 1387 ntBASIC19.73■□□□□ 0.75
CDT1Q9H211 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.73■□□□□ 0.75
CDT1Q9H211 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
CDT1Q9H211 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 AC091607.1-201ENST00000490318 1060 ntBASIC19.73■□□□□ 0.75
CDT1Q9H211 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.73■□□□□ 0.75
CDT1Q9H211 AP000867.3-201ENST00000524675 377 ntBASIC19.73■□□□□ 0.75
CDT1Q9H211 MIR3652-201ENST00000579335 131 ntBASIC19.73■□□□□ 0.75
CDT1Q9H211 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.73■□□□□ 0.75
CDT1Q9H211 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDT1Q9H211 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDT1Q9H211 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.72■□□□□ 0.75
CDT1Q9H211 AC132938.6-201ENST00000623828 1655 ntBASIC19.72■□□□□ 0.75
CDT1Q9H211 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
CDT1Q9H211 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
CDT1Q9H211 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDT1Q9H211 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 AP005901.3-202ENST00000581653 237 ntBASIC19.72■□□□□ 0.75
CDT1Q9H211 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.72■□□□□ 0.75
CDT1Q9H211 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDT1Q9H211 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.72■□□□□ 0.75
CDT1Q9H211 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.72■□□□□ 0.75
CDT1Q9H211 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDT1Q9H211 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CDT1Q9H211 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDT1Q9H211 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDT1Q9H211 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDT1Q9H211 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.71■□□□□ 0.75
CDT1Q9H211 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms