Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTFDC1Q9BY42 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RTFDC1Q9BY42 AC116562.4-201ENST00000641316 2276 ntBASIC22.14■■□□□ 1.14
RTFDC1Q9BY42 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTFDC1Q9BY42 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTFDC1Q9BY42 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RTFDC1Q9BY42 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 UPF3AP3-201ENST00000420996 769 ntBASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 MED15P5-201ENST00000423150 992 ntBASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 OR7E14P-202ENST00000530490 1290 ntBASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTFDC1Q9BY42 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 KRT18P65-201ENST00000439811 1286 ntBASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 RNA5SP415-201ENST00000517246 115 ntBASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 Z83851.2-201ENST00000609564 659 ntBASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 AC008735.5-201ENST00000623544 497 ntBASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 AL139288.1-201ENST00000623748 933 ntBASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTFDC1Q9BY42 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 RPSAP43-201ENST00000402237 625 ntBASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 AC092910.1-201ENST00000482027 1129 ntBASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 AL691403.2-201ENST00000618460 490 ntBASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 LINC00602-201ENST00000629776 2065 ntBASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.11■■□□□ 1.13
RTFDC1Q9BY42 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RTFDC1Q9BY42 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTFDC1Q9BY42 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTFDC1Q9BY42 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms