Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20■□□□□ 0.79
TRAIPQ9BWF2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAIPQ9BWF2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 LINC00265-3P-201ENST00000447588 903 ntBASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 TOB2P1-201ENST00000469761 992 ntBASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 RN7SL510P-201ENST00000581311 263 ntBASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 IGHV3-41-201ENST00000613121 348 ntBASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAIPQ9BWF2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 FAAHP1-202ENST00000446499 1238 ntBASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAIPQ9BWF2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 AL353692.3-201ENST00000407031 1396 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 AC233702.3-201ENST00000578656 1387 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 MIR149-201ENST00000384879 89 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 UNC93B7-201ENST00000509439 705 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 GUSBP12-201ENST00000513727 720 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 AL049812.1-201ENST00000432563 2267 ntBASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAIPQ9BWF2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAIPQ9BWF2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms