Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ESPNP-201ENST00000270691 2015 ntBASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 AC008687.5-201ENST00000593746 558 ntBASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2Q9BSQ5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 AC024563.2-201ENST00000603282 481 ntBASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 AC083849.1-201ENST00000615227 514 ntBASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 LINC01126-201ENST00000623515 1646 ntBASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2Q9BSQ5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 AC138932.1-201ENST00000534164 6830 ntBASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 AL136038.3-201ENST00000561909 1096 ntBASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCM2Q9BSQ5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCM2Q9BSQ5 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
CCM2Q9BSQ5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 MIR662-201ENST00000384847 95 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms