Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRQ99707 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRQ99707 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRQ99707 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRQ99707 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.61■□□□□ 0.89
MTRQ99707 AC104390.1-201ENST00000555663 520 ntBASIC20.61■□□□□ 0.89
MTRQ99707 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRQ99707 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
MTRQ99707 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
MTRQ99707 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRQ99707 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRQ99707 AC005332.8-201ENST00000622750 2735 ntBASIC20.61■□□□□ 0.89
MTRQ99707 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MTRQ99707 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.61■□□□□ 0.89
MTRQ99707 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRQ99707 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.6■□□□□ 0.89
MTRQ99707 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.6■□□□□ 0.89
MTRQ99707 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRQ99707 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRQ99707 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.59■□□□□ 0.89
MTRQ99707 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.59■□□□□ 0.89
MTRQ99707 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.59■□□□□ 0.89
MTRQ99707 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.59■□□□□ 0.89
MTRQ99707 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.59■□□□□ 0.89
MTRQ99707 MIR3917-201ENST00000580971 93 ntBASIC20.59■□□□□ 0.89
MTRQ99707 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MTRQ99707 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 AC067852.2-201ENST00000590513 2313 ntBASIC20.59■□□□□ 0.89
MTRQ99707 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.59■□□□□ 0.89
MTRQ99707 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.59■□□□□ 0.89
MTRQ99707 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MTRQ99707 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
MTRQ99707 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MTRQ99707 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTRQ99707 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.58■□□□□ 0.89
MTRQ99707 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MTRQ99707 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.58■□□□□ 0.89
MTRQ99707 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.58■□□□□ 0.89
MTRQ99707 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MTRQ99707 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.58■□□□□ 0.89
MTRQ99707 AC010240.3-201ENST00000607688 395 ntBASIC20.58■□□□□ 0.89
MTRQ99707 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.58■□□□□ 0.89
MTRQ99707 AL157888.1-201ENST00000631930 593 ntBASIC20.58■□□□□ 0.89
MTRQ99707 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTRQ99707 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.58■□□□□ 0.89
MTRQ99707 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MTRQ99707 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.58■□□□□ 0.88
MTRQ99707 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
MTRQ99707 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.58■□□□□ 0.88
MTRQ99707 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTRQ99707 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
MTRQ99707 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MTRQ99707 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MTRQ99707 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.58■□□□□ 0.88
MTRQ99707 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
MTRQ99707 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTRQ99707 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.57■□□□□ 0.88
MTRQ99707 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTRQ99707 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms