Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD1Q96RS6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 AC141257.4-201ENST00000634557 245 ntBASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 AC136944.6-201ENST00000634818 245 ntBASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 AL031598.1-201ENST00000561511 1773 ntBASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 Z98044.1-201ENST00000632503 1764 ntBASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD1Q96RS6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 AC009947.2-201ENST00000444014 672 ntBASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD1Q96RS6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 AC034236.2-201ENST00000606662 1610 ntBASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NUDCD1Q96RS6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms