Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AL031432.2-201ENST00000566714 459 ntBASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AL928711.1-201ENST00000570165 459 ntBASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 GABARAPL3-202ENST00000624044 1851 ntBASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 Z92544.3-201ENST00000624747 417 ntBASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 OR7E14P-202ENST00000530490 1290 ntBASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 RCN1P2-201ENST00000398357 915 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 DUX4L17-201ENST00000557360 1267 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AC093512.1-201ENST00000617969 520 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AC087641.1-201ENST00000557561 1021 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AL390955.2-201ENST00000603032 514 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AC008735.5-201ENST00000623544 497 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 AL356309.3-201ENST00000624132 1934 ntBASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.5■□□□□ 0.07
CSMD1Q96PZ7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 TCF3P1-201ENST00000423021 1937 ntBASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 ZNF815P-204ENST00000434898 1737 ntBASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 AC005498.2-205ENST00000593218 784 ntBASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 AC063926.2-201ENST00000623766 1308 ntBASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD1Q96PZ7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 AC015922.1-201ENST00000421102 1152 ntBASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms