Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 KRT8P7-201ENST00000533003 1432 ntBASIC14.22□□□□□ -0.13
DUX3Q96PT4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX3Q96PT4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DUX3Q96PT4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 TSSC2-201ENST00000450217 709 ntBASIC14.21□□□□□ -0.13
DUX3Q96PT4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 AL121672.3-201ENST00000608644 468 ntBASIC14.21□□□□□ -0.13
DUX3Q96PT4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DUX3Q96PT4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX3Q96PT4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX3Q96PT4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX3Q96PT4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX3Q96PT4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX3Q96PT4 AC016734.2-201ENST00000624325 1377 ntBASIC14.21□□□□□ -0.14
DUX3Q96PT4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX3Q96PT4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
DUX3Q96PT4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
DUX3Q96PT4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.2□□□□□ -0.14
DUX3Q96PT4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX3Q96PT4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX3Q96PT4 AL499627.1-201ENST00000569373 2188 ntBASIC14.2□□□□□ -0.14
DUX3Q96PT4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DUX3Q96PT4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 AC005082.1-201ENST00000413042 2259 ntBASIC14.2□□□□□ -0.14
DUX3Q96PT4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX3Q96PT4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.2□□□□□ -0.14
DUX3Q96PT4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX3Q96PT4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms