Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM11Q96F44 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM11Q96F44 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM11Q96F44 CYP2D8P-201ENST00000433633 1490 ntBASIC19.35■□□□□ 0.69
TRIM11Q96F44 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM11Q96F44 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AL133373.2-201ENST00000623187 2828 ntBASIC19.34■□□□□ 0.69
TRIM11Q96F44 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AC093010.1-201ENST00000473625 1624 ntBASIC19.34■□□□□ 0.69
TRIM11Q96F44 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 HMGA1P5-201ENST00000412453 271 ntBASIC19.34■□□□□ 0.69
TRIM11Q96F44 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM11Q96F44 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM11Q96F44 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM11Q96F44 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM11Q96F44 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM11Q96F44 NEK4P2-201ENST00000580004 1012 ntBASIC19.33■□□□□ 0.68
TRIM11Q96F44 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM11Q96F44 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM11Q96F44 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM11Q96F44 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM11Q96F44 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM11Q96F44 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM11Q96F44 KRT8P9-201ENST00000558927 1449 ntBASIC19.33■□□□□ 0.68
TRIM11Q96F44 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 INGX-201ENST00000359239 846 ntBASIC19.32■□□□□ 0.68
TRIM11Q96F44 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 AP000523.1-201ENST00000398242 1049 ntBASIC19.32■□□□□ 0.68
TRIM11Q96F44 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 AC009947.2-201ENST00000444014 672 ntBASIC19.32■□□□□ 0.68
TRIM11Q96F44 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 GNAS-203ENST00000306120 1878 ntBASIC19.32■□□□□ 0.68
TRIM11Q96F44 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM11Q96F44 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM11Q96F44 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms