Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PGAM5P1-201ENST00000518923 814 ntBASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 AC104109.2-201ENST00000602919 1418 ntBASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 AC099343.3-201ENST00000605834 2503 ntBASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 IGHV3-22-201ENST00000520721 359 ntBASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC021087.4-201ENST00000563761 564 ntBASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC145285.3-201ENST00000564603 959 ntBASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AL691403.2-201ENST00000618460 490 ntBASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 AC009102.3-201ENST00000623118 1491 ntBASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP40Q96DI7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SNRNP40Q96DI7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.22
SNRNP40Q96DI7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 AP005117.1-201ENST00000584346 1413 ntBASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 AC027601.4-201ENST00000611259 610 ntBASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP40Q96DI7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms