Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 HLA-F-220ENST00000434407 884 ntBASIC19.65■□□□□ 0.74
SEMA4DQ92854 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 AL136038.4-201ENST00000603606 1261 ntBASIC19.65■□□□□ 0.74
SEMA4DQ92854 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4DQ92854 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4DQ92854 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4DQ92854 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4DQ92854 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4DQ92854 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
SEMA4DQ92854 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4DQ92854 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.64■□□□□ 0.74
SEMA4DQ92854 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4DQ92854 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.64■□□□□ 0.74
SEMA4DQ92854 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 AC093010.1-201ENST00000473625 1624 ntBASIC19.64■□□□□ 0.73
SEMA4DQ92854 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA4DQ92854 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4DQ92854 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 AC112907.2-201ENST00000448639 330 ntBASIC19.63■□□□□ 0.73
SEMA4DQ92854 HOMER2P1-201ENST00000455653 964 ntBASIC19.63■□□□□ 0.73
SEMA4DQ92854 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 AC022616.7-201ENST00000525383 220 ntBASIC19.63■□□□□ 0.73
SEMA4DQ92854 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms