Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6NLQ92738 AC012640.2-201ENST00000561606 901 ntBASIC20.65■□□□□ 0.9
USP6NLQ92738 FAM197Y3-203ENST00000618346 717 ntBASIC20.65■□□□□ 0.9
USP6NLQ92738 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6NLQ92738 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP6NLQ92738 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
USP6NLQ92738 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 SDHAP2-201ENST00000455183 2001 ntBASIC20.65■□□□□ 0.9
USP6NLQ92738 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP6NLQ92738 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
USP6NLQ92738 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
USP6NLQ92738 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP6NLQ92738 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP6NLQ92738 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6NLQ92738 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP6NLQ92738 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
USP6NLQ92738 RPS2P1-201ENST00000434010 821 ntBASIC20.64■□□□□ 0.89
USP6NLQ92738 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.64■□□□□ 0.89
USP6NLQ92738 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6NLQ92738 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.64■□□□□ 0.89
USP6NLQ92738 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.64■□□□□ 0.89
USP6NLQ92738 AC140113.2-201ENST00000604370 208 ntBASIC20.64■□□□□ 0.89
USP6NLQ92738 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
USP6NLQ92738 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP6NLQ92738 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
USP6NLQ92738 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6NLQ92738 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6NLQ92738 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
USP6NLQ92738 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6NLQ92738 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6NLQ92738 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6NLQ92738 AL356488.2-201ENST00000602755 427 ntBASIC20.63■□□□□ 0.89
USP6NLQ92738 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6NLQ92738 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6NLQ92738 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6NLQ92738 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP6NLQ92738 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
USP6NLQ92738 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6NLQ92738 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6NLQ92738 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6NLQ92738 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6NLQ92738 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6NLQ92738 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 AC025062.2-201ENST00000605477 670 ntBASIC20.62■□□□□ 0.89
USP6NLQ92738 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
USP6NLQ92738 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP6NLQ92738 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.62■□□□□ 0.89
USP6NLQ92738 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP6NLQ92738 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP6NLQ92738 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6NLQ92738 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6NLQ92738 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms