Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
AP3S1Q92572 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3S1Q92572 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.12■□□□□ 0.17
AP3S1Q92572 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 AL160286.2-201ENST00000567150 934 ntBASIC16.12■□□□□ 0.17
AP3S1Q92572 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
AP3S1Q92572 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.12■□□□□ 0.17
AP3S1Q92572 GMCL1P1-201ENST00000463439 1581 ntBASIC16.12■□□□□ 0.17
AP3S1Q92572 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
AP3S1Q92572 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.12■□□□□ 0.17
AP3S1Q92572 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3S1Q92572 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3S1Q92572 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP3S1Q92572 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3S1Q92572 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3S1Q92572 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP3S1Q92572 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP3S1Q92572 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3S1Q92572 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP3S1Q92572 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3S1Q92572 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3S1Q92572 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP3S1Q92572 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.1■□□□□ 0.17
AP3S1Q92572 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 AL512625.2-201ENST00000417533 625 ntBASIC16.1■□□□□ 0.17
AP3S1Q92572 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.1■□□□□ 0.17
AP3S1Q92572 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3S1Q92572 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3S1Q92572 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3S1Q92572 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
AP3S1Q92572 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms