Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
NKX2-3Q8TAU0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-3Q8TAU0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.62■■□□□ 1.05
NKX2-3Q8TAU0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.62■■□□□ 1.05
NKX2-3Q8TAU0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AL162741.1-201ENST00000565563 1558 ntBASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 KRT18P1-202ENST00000452408 1331 ntBASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AP002383.4-201ENST00000442518 975 ntBASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 AP002414.4-201ENST00000589764 1148 ntBASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NKX2-3Q8TAU0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 AC090164.3-201ENST00000610780 2143 ntBASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.6■■□□□ 1.05
NKX2-3Q8TAU0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-3Q8TAU0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 AC079776.4-201ENST00000511039 504 ntBASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 KRT8P26-201ENST00000534154 1276 ntBASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.58■■□□□ 1.05
NKX2-3Q8TAU0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-3Q8TAU0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-3Q8TAU0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NKX2-3Q8TAU0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.58■■□□□ 1.04
NKX2-3Q8TAU0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.58■■□□□ 1.04
NKX2-3Q8TAU0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.57■■□□□ 1.04
NKX2-3Q8TAU0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms