Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 KRT18P23-201ENST00000435622 1283 ntBASIC20.69■□□□□ 0.9
RETREG2Q8NC44 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 LINC01711-201ENST00000598340 967 ntBASIC20.69■□□□□ 0.9
RETREG2Q8NC44 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETREG2Q8NC44 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 AL391807.1-203ENST00000604392 2365 ntBASIC20.68■□□□□ 0.9
RETREG2Q8NC44 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 MIR662-201ENST00000384847 95 ntBASIC20.68■□□□□ 0.9
RETREG2Q8NC44 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 MIR3917-201ENST00000580971 93 ntBASIC20.68■□□□□ 0.9
RETREG2Q8NC44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 HOXB1-202ENST00000577092 1414 ntBASIC20.68■□□□□ 0.9
RETREG2Q8NC44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETREG2Q8NC44 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 IFNL4P1-201ENST00000607083 540 ntBASIC20.67■□□□□ 0.9
RETREG2Q8NC44 AL121772.3-201ENST00000610840 674 ntBASIC20.67■□□□□ 0.9
RETREG2Q8NC44 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 AC034236.2-201ENST00000606662 1610 ntBASIC20.67■□□□□ 0.9
RETREG2Q8NC44 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETREG2Q8NC44 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 AP000867.3-201ENST00000524675 377 ntBASIC20.66■□□□□ 0.9
RETREG2Q8NC44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 AC068587.9-201ENST00000641814 219 ntBASIC20.66■□□□□ 0.9
RETREG2Q8NC44 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms