Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.27□□□□□ -0.12
C3orf56Q8N813 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
C3orf56Q8N813 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C3orf56Q8N813 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
C3orf56Q8N813 KRT18P28-201ENST00000453838 1332 ntBASIC14.27□□□□□ -0.12
C3orf56Q8N813 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 AC120498.9-201ENST00000339021 3867 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 AC211486.1-202ENST00000416371 468 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 HTR5BP-201ENST00000430851 1154 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 DNAJB3-202ENST00000449667 1266 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 AC211476.1-201ENST00000503899 468 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 OR7E14P-202ENST00000530490 1290 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 AC034105.1-201ENST00000563488 319 ntBASIC14.27□□□□□ -0.13
C3orf56Q8N813 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.27□□□□□ -0.13
C3orf56Q8N813 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C3orf56Q8N813 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AC244107.1-201ENST00000442033 332 ntBASIC14.26□□□□□ -0.13
C3orf56Q8N813 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 RNA5SP415-201ENST00000517246 115 ntBASIC14.26□□□□□ -0.13
C3orf56Q8N813 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AP001269.4-201ENST00000609611 512 ntBASIC14.26□□□□□ -0.13
C3orf56Q8N813 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C3orf56Q8N813 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C3orf56Q8N813 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.25□□□□□ -0.13
C3orf56Q8N813 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C3orf56Q8N813 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms