Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 AC135776.1-201ENST00000319817 2481 ntBASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 ECEL1P3-201ENST00000427961 737 ntBASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 AC010240.3-201ENST00000607688 395 ntBASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 AC073912.3-201ENST00000624414 853 ntBASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.46□□□□□ -0.09
TTC9CQ8N5M4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TTC9CQ8N5M4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 ESPNP-201ENST00000270691 2015 ntBASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SEC1P-202ENST00000473944 940 ntBASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TTC9CQ8N5M4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms