Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 PHGDH-209ENST00000641074 1780 ntBASIC19.41■□□□□ 0.7
TTC39CQ8N584 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 IGHGP-201ENST00000390555 1178 ntBASIC19.4■□□□□ 0.7
TTC39CQ8N584 AL645929.1-201ENST00000420084 975 ntBASIC19.4■□□□□ 0.7
TTC39CQ8N584 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 AC010331.1-201ENST00000611423 582 ntBASIC19.4■□□□□ 0.7
TTC39CQ8N584 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39CQ8N584 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.4■□□□□ 0.7
TTC39CQ8N584 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39CQ8N584 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
TTC39CQ8N584 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39CQ8N584 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.39■□□□□ 0.7
TTC39CQ8N584 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39CQ8N584 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 SPDYE13P-201ENST00000445314 798 ntBASIC19.39■□□□□ 0.69
TTC39CQ8N584 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 VENTXP5-201ENST00000523979 775 ntBASIC19.39■□□□□ 0.69
TTC39CQ8N584 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 GPR32P1-201ENST00000601788 811 ntBASIC19.39■□□□□ 0.69
TTC39CQ8N584 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.39■□□□□ 0.69
TTC39CQ8N584 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39CQ8N584 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.39■□□□□ 0.69
TTC39CQ8N584 AC135776.1-201ENST00000319817 2481 ntBASIC19.39■□□□□ 0.69
TTC39CQ8N584 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39CQ8N584 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.38■□□□□ 0.69
TTC39CQ8N584 ABALON-201ENST00000629058 1903 ntBASIC19.38■□□□□ 0.69
TTC39CQ8N584 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.37■□□□□ 0.69
TTC39CQ8N584 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.37■□□□□ 0.69
TTC39CQ8N584 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TTC39CQ8N584 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.37■□□□□ 0.69
TTC39CQ8N584 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39CQ8N584 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms