Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 AC093010.1-201ENST00000473625 1624 ntBASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 DRAXINP1-201ENST00000437611 948 ntBASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 AC090616.6-201ENST00000582640 721 ntBASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 AC093458.2-201ENST00000623150 629 ntBASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ARHGEF39Q8N4T4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
ARHGEF39Q8N4T4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARHGEF39Q8N4T4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
ARHGEF39Q8N4T4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 TPSP2-201ENST00000561760 610 ntBASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 AP002414.4-201ENST00000589764 1148 ntBASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ARHGEF39Q8N4T4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 LINC00602-201ENST00000629776 2065 ntBASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 AL592071.1-201ENST00000611956 408 ntBASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 AC092119.3-201ENST00000612618 583 ntBASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 AC135776.1-201ENST00000319817 2481 ntBASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARHGEF39Q8N4T4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 AC104581.1-202ENST00000635932 2618 ntBASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms