Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 KRT126P-201ENST00000549467 1181 ntBASIC28.46■■■□□ 2.15
VPS8Q8N3P4 PNN-202ENST00000553331 656 ntTSL 3 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 AL732292.2-201ENST00000609649 430 ntBASIC28.46■■■□□ 2.15
VPS8Q8N3P4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC28.46■■■□□ 2.15
VPS8Q8N3P4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 TSPY19P-201ENST00000418461 509 ntBASIC28.45■■■□□ 2.15
VPS8Q8N3P4 TSPY18P-201ENST00000441642 509 ntBASIC28.45■■■□□ 2.15
VPS8Q8N3P4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
VPS8Q8N3P4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC28.45■■■□□ 2.14
VPS8Q8N3P4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VPS8Q8N3P4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC112698.1-201ENST00000510299 916 ntBASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC138894.3-201ENST00000603787 634 ntBASIC28.43■■■□□ 2.14
VPS8Q8N3P4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 DUTP2-201ENST00000519164 463 ntBASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC28.43■■■□□ 2.14
VPS8Q8N3P4 AC099336.1-202ENST00000602961 463 ntBASIC28.43■■■□□ 2.14
VPS8Q8N3P4 IFNL4P1-201ENST00000607083 540 ntBASIC28.43■■■□□ 2.14
VPS8Q8N3P4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 AC011840.4-201ENST00000578471 627 ntBASIC28.42■■■□□ 2.14
VPS8Q8N3P4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC28.42■■■□□ 2.14
VPS8Q8N3P4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms