Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 AC009065.1-201ENST00000564055 1225 ntBASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 MIR3180-4-201ENST00000582223 153 ntBASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC116Q8IYX3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 AP000523.1-201ENST00000398242 1049 ntBASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 AL137013.1-201ENST00000432946 1228 ntBASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC116Q8IYX3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 AC140113.3-201ENST00000605663 199 ntBASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC116Q8IYX3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms