Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEFF1Q8IYR6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 FGFR3P6-201ENST00000457012 610 ntBASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 FAM215A-202ENST00000632077 792 ntBASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEFF1Q8IYR6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 AC116407.3-201ENST00000623905 1129 ntBASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 ZNF259P1-201ENST00000407656 1365 ntBASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TMEFF1Q8IYR6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 AC120498.9-201ENST00000339021 3867 ntBASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 BX842568.4-201ENST00000421222 227 ntBASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 KRT18P41-201ENST00000518924 1277 ntBASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEFF1Q8IYR6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC112777.1-201ENST00000540175 1423 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms