Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC56Q8IYG6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC56Q8IYG6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC56Q8IYG6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC56Q8IYG6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 AC024563.2-201ENST00000603282 481 ntBASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 LINC01311-201ENST00000565162 1445 ntBASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC56Q8IYG6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 VENTXP5-201ENST00000523979 775 ntBASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 LINC01238-205ENST00000567549 1107 ntBASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC56Q8IYG6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 AL031133.1-201ENST00000406807 723 ntBASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 AL671277.2-201ENST00000458060 996 ntBASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 AC113404.2-201ENST00000507884 177 ntBASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC56Q8IYG6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms