Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 KRT8P9-201ENST00000558927 1449 ntBASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 LETM1P2-201ENST00000597330 2178 ntBASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00346Q8IVM7 AL163051.1-201ENST00000569214 1512 ntBASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 INGX-201ENST00000359239 846 ntBASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 SDHAP2-201ENST00000455183 2001 ntBASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00346Q8IVM7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AC008764.6-201ENST00000595909 2069 ntBASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AL096828.2-201ENST00000567259 1965 ntBASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AC009102.3-201ENST00000623118 1491 ntBASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms