Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 LINC01311-201ENST00000565162 1445 ntBASIC17.87■□□□□ 0.45
VRK3Q8IV63 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK3Q8IV63 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK3Q8IV63 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 AL671277.2-201ENST00000458060 996 ntBASIC17.86■□□□□ 0.45
VRK3Q8IV63 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK3Q8IV63 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK3Q8IV63 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK3Q8IV63 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK3Q8IV63 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VRK3Q8IV63 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK3Q8IV63 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms