Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL022326.1-202ENST00000641533 845 ntBASIC22.85■■□□□ 1.25
COL23A1Q86Y22 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 AC002310.6-201ENST00000624451 1377 ntBASIC22.85■■□□□ 1.25
COL23A1Q86Y22 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL23A1Q86Y22 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.84■■□□□ 1.25
COL23A1Q86Y22 COX20P2-201ENST00000452636 358 ntBASIC22.84■■□□□ 1.25
COL23A1Q86Y22 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 SPCS2P1-201ENST00000561636 679 ntBASIC22.84■■□□□ 1.25
COL23A1Q86Y22 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.84■■□□□ 1.25
COL23A1Q86Y22 AC004817.3-201ENST00000602957 2129 ntBASIC22.84■■□□□ 1.25
COL23A1Q86Y22 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 AC011467.4-201ENST00000594891 528 ntBASIC22.83■■□□□ 1.25
COL23A1Q86Y22 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.83■■□□□ 1.25
COL23A1Q86Y22 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.83■■□□□ 1.24
COL23A1Q86Y22 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 LINC01006-201ENST00000333319 2292 ntBASIC22.82■■□□□ 1.24
COL23A1Q86Y22 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 AC125437.2-201ENST00000625180 2167 ntBASIC22.82■■□□□ 1.24
COL23A1Q86Y22 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 AC006557.2-201ENST00000592985 1240 ntBASIC22.82■■□□□ 1.24
COL23A1Q86Y22 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
COL23A1Q86Y22 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AC136632.2-201ENST00000512891 861 ntBASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 AL513190.1-201ENST00000621254 727 ntBASIC22.81■■□□□ 1.24
COL23A1Q86Y22 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL23A1Q86Y22 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms