Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.29■□□□□ 0.2
LRRC28Q86X40 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 AC131212.4-201ENST00000623606 975 ntBASIC16.29■□□□□ 0.2
LRRC28Q86X40 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.29■□□□□ 0.2
LRRC28Q86X40 AC093677.2-201ENST00000600169 1863 ntBASIC16.29■□□□□ 0.2
LRRC28Q86X40 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 HEIH-201ENST00000623091 1652 ntBASIC16.28■□□□□ 0.2
LRRC28Q86X40 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC28Q86X40 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC28Q86X40 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.27■□□□□ 0.2
LRRC28Q86X40 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 AC116562.2-201ENST00000507042 360 ntBASIC16.27■□□□□ 0.2
LRRC28Q86X40 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC28Q86X40 AL355075.4-201ENST00000554988 638 ntBASIC16.27■□□□□ 0.2
LRRC28Q86X40 HLA-A-209ENST00000638375 975 ntBASIC16.27■□□□□ 0.2
LRRC28Q86X40 MYC-208ENST00000641036 567 ntBASIC16.27■□□□□ 0.2
LRRC28Q86X40 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC28Q86X40 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC28Q86X40 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LRRC28Q86X40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.27■□□□□ 0.19
LRRC28Q86X40 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.27■□□□□ 0.19
LRRC28Q86X40 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC28Q86X40 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 AC084018.2-201ENST00000613093 2607 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms