Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 AC125634.1-201ENST00000438758 1403 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 UNC93B6-202ENST00000528242 690 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 AC005332.7-201ENST00000614046 2005 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AC011840.4-201ENST00000578471 627 ntBASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AC106028.4-201ENST00000614509 607 ntBASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AL161938.1-201ENST00000569833 2180 ntBASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13BQ7Z7G8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 MTDHP5-201ENST00000598980 586 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC002347.1-201ENST00000569543 541 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 TP73-AS1-210ENST00000637775 1455 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AL353692.3-201ENST00000407031 1396 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms