Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 AC008556.1-201ENST00000610908 2040 ntBASIC17.16■□□□□ 0.34
RTL4Q6ZR62 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL4Q6ZR62 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 STARP1-201ENST00000397973 869 ntBASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AC034232.1-201ENST00000506026 1064 ntBASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 AC112497.1-201ENST00000624824 639 ntBASIC17.15■□□□□ 0.34
RTL4Q6ZR62 MYC-208ENST00000641036 567 ntBASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL4Q6ZR62 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
RTL4Q6ZR62 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTL4Q6ZR62 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTL4Q6ZR62 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 AC024243.1-201ENST00000609234 778 ntBASIC17.14■□□□□ 0.33
RTL4Q6ZR62 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RTL4Q6ZR62 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 KRT8P7-201ENST00000533003 1432 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 AC135050.7-201ENST00000624508 2218 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ANO7L1-203ENST00000602586 1720 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms