Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 AC133681.1-201ENST00000465482 601 ntBASIC15.95■□□□□ 0.14
C11orf88Q6PI97 AC120498.8-201ENST00000614275 531 ntBASIC15.95■□□□□ 0.14
C11orf88Q6PI97 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 AC126763.1-201ENST00000552015 2118 ntBASIC15.95■□□□□ 0.14
C11orf88Q6PI97 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 AL162741.1-201ENST00000565563 1558 ntBASIC15.95■□□□□ 0.14
C11orf88Q6PI97 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AC134043.2-201ENST00000624206 2238 ntBASIC15.94■□□□□ 0.14
C11orf88Q6PI97 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AC012618.2-201ENST00000428058 849 ntBASIC15.94■□□□□ 0.14
C11orf88Q6PI97 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 PRKY-204ENST00000533551 1019 ntBASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.94■□□□□ 0.14
C11orf88Q6PI97 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AC239809.2-201ENST00000415381 517 ntBASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AL596275.1-201ENST00000423464 877 ntBASIC15.93■□□□□ 0.14
C11orf88Q6PI97 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 MIR4497-201ENST00000583208 89 ntBASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 AC006557.6-201ENST00000623071 864 ntBASIC15.93■□□□□ 0.14
C11orf88Q6PI97 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms