Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 SDHAP1-207ENST00000440850 2000 ntBASIC9.92□□□□□ -0.82
UBR4Q5T4S7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AC007551.1-201ENST00000457394 519 ntBASIC9.92□□□□□ -0.82
UBR4Q5T4S7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AL109659.2-201ENST00000606809 1674 ntBASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 KRT8P7-201ENST00000533003 1432 ntBASIC9.92□□□□□ -0.82
UBR4Q5T4S7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 MYCLP1-201ENST00000372451 1075 ntBASIC9.91□□□□□ -0.82
UBR4Q5T4S7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 TMEM14DP-201ENST00000422205 345 ntBASIC9.91□□□□□ -0.82
UBR4Q5T4S7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 BAD-207ENST00000544785 525 ntTSL 3 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 AC104390.1-201ENST00000555663 520 ntBASIC9.91□□□□□ -0.82
UBR4Q5T4S7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 KRT89P-201ENST00000620027 1478 ntBASIC9.91□□□□□ -0.82
UBR4Q5T4S7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
UBR4Q5T4S7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 RHOQP3-201ENST00000437982 621 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC074386.1-202ENST00000463561 864 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC069335.1-201ENST00000489972 472 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC010654.1-201ENST00000615722 808 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SPDYE21P-201ENST00000413323 827 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms