Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 MIR149-201ENST00000384879 89 ntBASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 MIR3180-5-201ENST00000583743 153 ntBASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 AC036111.1-201ENST00000533973 1582 ntBASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 FAM197Y1-201ENST00000421178 764 ntBASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 PRORSD1P-202ENST00000563365 2154 ntBASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 AC093010.1-201ENST00000473625 1624 ntBASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RUNDC3AQ59EK9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RUNDC3AQ59EK9 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 CA15P1-201ENST00000481698 905 ntBASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 DGCR10-201ENST00000609839 495 ntBASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.26■□□□□ 0.35
RUNDC3AQ59EK9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms