Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 POM121L3P-201ENST00000419331 1163 ntBASIC21.27■■□□□ 1
SHROOM1Q2M3G4 MTCL1P1-201ENST00000446207 792 ntBASIC21.27■■□□□ 1
SHROOM1Q2M3G4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 SLC25A1P1-201ENST00000528351 927 ntBASIC21.27■■□□□ 1
SHROOM1Q2M3G4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SHROOM1Q2M3G4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.27■□□□□ 0.99
SHROOM1Q2M3G4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 FAM197Y8-203ENST00000450145 560 ntBASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 AP001269.4-201ENST00000609611 512 ntBASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 AC120114.3-201ENST00000611923 658 ntBASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHROOM1Q2M3G4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 AL662844.1-201ENST00000546340 181 ntBASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 AL138831.2-201ENST00000606564 490 ntBASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.25■□□□□ 0.99
SHROOM1Q2M3G4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC008608.2-201ENST00000606089 416 ntBASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC132938.6-201ENST00000623828 1655 ntBASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.24■□□□□ 0.99
SHROOM1Q2M3G4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms